Nuclc. Acids. Res. OUP
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Database Category:  RNA Sequences


16S and 23S Ribosomal RNA Mutation Database   Triman, K.L., Paull, D.S.
16S and 23S ribosomal RNA mutations
database   summary

5S Ribosomal RNA Database
5S rRNA sequences
database   summary

ARED   Bakheet, T.1, Williams, B2, Khabar, K.2
AU-rich element-containing mRNAs
database   summary

Database for mobile group II introns   Dai, L., Toor, N., Olson, R., Keeping, A., Zimmerly, S.
Database for mobile group II introns
database   summary

Guide RNA Database
Guide RNA sequences
database   summary

HyPaLib
Structural elements characteristic for classes of RNA
database   summary

Intronerator
RNA splicing and gene structure in C. elegans; alignments of C. briggsae and C. elegans genomic sequences
database   summary

IRESdb : the Internal Ribosome Entry Site database   Bonnal, S., Boutonnet, C., Prado-Lourenco, L., Vagner, S.
The Internal Ribosome Entry Site database
database   summary

NCIR   Nagaswamy, U., Larios-Sanz, M., Hury, J., Wang, J., Kalaimani, K., Zhao, Q., Fox, G. E.
Non-standard base-base interactions in known RNA structures
database   summary

Noncoding regulatory RNAs database   Szymanski, M.1, Erdmann, V.A.2, Barciszewski, J.1
Noncoding RNAs with regulatory functions
database   summary

PLANTncRNAs   MacIntosh, G.C.1, Macalincag, M-C.P.1, Green, P.J.2
Plant non-protein coding RNAs with relevant gene expression information
database   summary

PLMItRNA   Guglielmo Rainaldi1, Mariateresa Volpicella1, Flavio Licciulli2, Sabino Liuni2, Raffaele Gallerani1, Luigi Ruggiero Ceci2
Mitochondrial tRNA genes and molecules in photosynthetic eukaryotes
database   summary

PseudoBase   Batenburg,F.H.D.van1, Gultyaev,A.P.1, Pleij,C.W.A.2
Structural, functional and sequence data related to RNA pseudoknots
database   summary

Rfam   Griffiths-Jones, S.1, Bateman, A.1, Marshall, M.1, Khanna, A.2, Eddy, S.R.2
Non-coding RNA families
database   summary

Ribosomal Database Project (RDP-II)   Cole, J.R.1, Chai, B.1, Wang, Q.1, Chandra, S.1, Farris, R.J.1, Kulam, S.A.1, McGarrel, D.M.1, Schmidt, T.M.2, Garrity, G.M.2, Tiedje, J.M.2
rRNA sequence data, analysis tools, alignments, and phylogenies
database   summary

RISCC
Ribosomal 16S-23S RNA gene spacer regions
database   summary

RNA Modification Database
Naturally modified nucleosides in RNA
database   summary

SELEXdb
Selected DNA/RNA functional site sequences
database   summary

Small RNA Database
Direct sequencing of small RNA sequences from prokaryotes and eukaryotes
database   summary

SRPDB   Alm Rosenblad, M.1, Gorodkin, J.2, Knudsen, B.3, Zwieb, C.4, Samuelsson, T.1
Signal recognition particle RNA, SRP protein, and SRP receptor sequences and alignments
database   summary

Subviral RNA Database
Database of viroids and viroid-like RNAs
database   summary

The tmRNA Website
tmRNA sequences, foldings, and alignments
database   summary

tmRDB   Zwieb, C1, Gorodkin, J2, Knudsen, B3, Burks, J1, Wower, J4
tmRNA (10Sa RNA) sequences and alignments
database   summary

tRNA Sequences
tRNA and tRNA gene sequences
database   summary

UTRdb/UTRsite   Pesole, G.1, Liuni, S.2, Grillo, G.2, Licciulli, F.3, Mignone, F.1, Gissi, C.1, Saccone, C.3
5' and 3' UTRs of eukaryotic mRNAs and relevant functional patterns
database   summary

Yeast snoRNA Database
Yeast small nucleolar RNAs
database   summary


Compilation Paper
Categories List
Alphabetical List
Search Summary Papers